STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RARGRetinoic acid receptor gamma. (510 aa)    
Predicted Functional Partners:
LOC106963931
Uncharacterized protein.
   
0.827
ENSPLAP00000013169
Uncharacterized protein.
    
 0.822
LOC106951907
Retinoid X receptor, alpha a.
   
0.794
RXRB
Retinoid X receptor beta.
   
0.794
LOC106962184
Retinoid x receptor, beta b.
   
0.794
ncor2
Nuclear receptor corepressor 2.
    
 0.791
ENSPLAP00000029324
GPS2_interact domain-containing protein.
    
 0.791
ENSPLAP00000030918
Uncharacterized protein.
    
 0.791
nr1d2
Nuclear receptor subfamily 1, group D, member 2b.
   
0.715
LOC106939560
Nuclear receptor subfamily 1, group D, member 2a.
   
0.715
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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