STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srpk1SRSF protein kinase 1a. (621 aa)    
Predicted Functional Partners:
srsf5
Serine and arginine rich splicing factor 5a.
    
 0.964
LOC106960849
Serine and arginine rich splicing factor 5b.
    
 0.964
LOC106934404
Serine and arginine rich splicing factor 4.
    
 0.962
LOC106949371
Serine and arginine rich splicing factor 9.
    
 0.961
LOC106952897
Serine and arginine rich splicing factor 6a.
    
 0.954
srsf2
Serine and arginine rich splicing factor 2a.
    
 0.951
LOC106947525
Uncharacterized protein.
    
 0.948
LOC106947524
Serine/arginine-rich splicing factor 1.
    
 0.948
SRSF3
Serine and arginine rich splicing factor 3b.
    
 0.936
LOC106951095
Serine and arginine rich splicing factor 7a.
    
 0.925
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.