LOC106942644 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106942644

Alpha/beta hydrolase domain-containing protein 17A-like. (319 aa)

Predicted Functional Partners:

LOC106936237

0.788

scp2

0.788

lypla2

0.628

lypla1

0.628

alg2

0.563

piga

0.556

LOC106959338

0.556

gys1

0.556

alg11

0.556

alg1

0.556

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106936237	LOC106942644	ENSPLAP00000014088	ENSPLAP00000011810	Sterol carrier protein 2b.	Alpha/beta hydrolase domain-containing protein 17A-like.	0.788
LOC106936237	scp2	ENSPLAP00000014088	ENSPLAP00000025287	Sterol carrier protein 2b.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.971
LOC106942644	LOC106936237	ENSPLAP00000011810	ENSPLAP00000014088	Alpha/beta hydrolase domain-containing protein 17A-like.	Sterol carrier protein 2b.	0.788
LOC106942644	LOC106959338	ENSPLAP00000011810	ENSPLAP00000018988	Alpha/beta hydrolase domain-containing protein 17A-like.	Uncharacterized protein.	0.556
LOC106942644	alg1	ENSPLAP00000011810	ENSPLAP00000029434	Alpha/beta hydrolase domain-containing protein 17A-like.	ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.	0.556
LOC106942644	alg11	ENSPLAP00000011810	ENSPLAP00000026492	Alpha/beta hydrolase domain-containing protein 17A-like.	ALG11 alpha-1,2-mannosyltransferase.	0.556
LOC106942644	alg2	ENSPLAP00000011810	ENSPLAP00000024118	Alpha/beta hydrolase domain-containing protein 17A-like.	ALG2 alpha-1,3/1,6-mannosyltransferase.	0.563
LOC106942644	gys1	ENSPLAP00000011810	ENSPLAP00000026440	Alpha/beta hydrolase domain-containing protein 17A-like.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.556
LOC106942644	lypla1	ENSPLAP00000011810	ENSPLAP00000025154	Alpha/beta hydrolase domain-containing protein 17A-like.	Lysophospholipase 1.	0.628
LOC106942644	lypla2	ENSPLAP00000011810	ENSPLAP00000020979	Alpha/beta hydrolase domain-containing protein 17A-like.	Lysophospholipase 2.	0.628
LOC106942644	piga	ENSPLAP00000011810	ENSPLAP00000005705	Alpha/beta hydrolase domain-containing protein 17A-like.	Phosphatidylinositol glycan anchor biosynthesis, class A.	0.556
LOC106942644	scp2	ENSPLAP00000011810	ENSPLAP00000025287	Alpha/beta hydrolase domain-containing protein 17A-like.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.788
LOC106959338	LOC106942644	ENSPLAP00000018988	ENSPLAP00000011810	Uncharacterized protein.	Alpha/beta hydrolase domain-containing protein 17A-like.	0.556
LOC106959338	alg1	ENSPLAP00000018988	ENSPLAP00000029434	Uncharacterized protein.	ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.	0.598
LOC106959338	alg11	ENSPLAP00000018988	ENSPLAP00000026492	Uncharacterized protein.	ALG11 alpha-1,2-mannosyltransferase.	0.909
LOC106959338	alg2	ENSPLAP00000018988	ENSPLAP00000024118	Uncharacterized protein.	ALG2 alpha-1,3/1,6-mannosyltransferase.	0.940
alg1	LOC106942644	ENSPLAP00000029434	ENSPLAP00000011810	ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.	Alpha/beta hydrolase domain-containing protein 17A-like.	0.556
alg1	LOC106959338	ENSPLAP00000029434	ENSPLAP00000018988	ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.	Uncharacterized protein.	0.598
alg1	alg11	ENSPLAP00000029434	ENSPLAP00000026492	ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.	ALG11 alpha-1,2-mannosyltransferase.	0.659
alg1	alg2	ENSPLAP00000029434	ENSPLAP00000024118	ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.	ALG2 alpha-1,3/1,6-mannosyltransferase.	0.965