STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frmpd2FERM and PDZ domain containing 2. (696 aa)    
Predicted Functional Partners:
ENSPLAP00000029627
Uncharacterized protein.
 
      0.784
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.707
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.706
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.705
ift172
Intraflagellar transport 172.
    
 0.702
ift88
Intraflagellar transport 88 homolog.
    
 0.695
ENSPLAP00000024276
Protein kinase domain-containing protein.
    
 0.688
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.688
cluap1
Clusterin associated protein 1.
    
 0.675
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.671
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.