STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106956967Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (315 aa)    
Predicted Functional Partners:
slc25a17
Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
  
 
0.905
LOC106936733
Peroxisomal biogenesis factor 19.
   
 0.878
LOC106936741
Uncharacterized protein.
   
 0.878
pex13
SH3 domain-containing protein.
   
 
 0.798
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.782
pex16
Peroxisomal membrane protein PEX16.
   
 
 0.782
abcd3
ATP-binding cassette, sub-family D (ALD), member 3a.
   
 
 0.740
pex3
Peroxisomal biogenesis factor 3.
   
 
 0.735
LOC106949972
Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.724
pxmp4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
     
 0.722
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.