STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sucoSUN domain containing ossification factor. (1383 aa)    
Predicted Functional Partners:
LOC106947874
Transmembrane anterior posterior transformation 1a.
    
   0.611
tapt1
Transmembrane anterior posterior transformation 1b.
    
   0.611
LOC106939962
Uncharacterized protein.
    
   0.611
sun2
SUN domain-containing protein.
    
 
 0.521
LOC106961621
Sad1 and UNC84 domain containing 1.
    
 
 0.521
rd3
Uncharacterized protein.
      
 0.512
ENSPLAP00000023186
Tubulin tyrosine ligase-like family, member 2.
      
 0.499
ENSPLAP00000027138
ANK_REP_REGION domain-containing protein.
    
 
 0.469
fam120c
Family with sequence similarity 120C.
      
 0.408
tubgcp3
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.406
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.