STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000013005Uncharacterized protein. (54 aa)    
Predicted Functional Partners:
got2
Aspartate aminotransferase.
   
 0.762
ccnf
Cyclin F; Belongs to the cyclin family.
    
 
 0.737
plk4
Polo-like kinase 4 (Drosophila).
    
 0.735
rimkla
Ribosomal modification protein rimK-like family member A.
  
 
 0.728
usp33
Ubiquitin carboxyl-terminal hydrolase.
    
 0.700
usp20
Ubiquitin carboxyl-terminal hydrolase.
    
 0.700
got1
Aspartate aminotransferase.
   
 0.675
GOT1
Aspartate aminotransferase.
   
 0.675
cep76
Centrosomal protein 76.
    
 
 0.665
tmem181
Transmembrane protein 181.
  
 0.664
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.