STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000013097Uncharacterized protein. (143 aa)    
Predicted Functional Partners:
nmbr
Neuromedin B receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.968
LOC106952002
Gastrin-releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.944
LOC106939314
Gastrin-releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.944
grp
Uncharacterized protein.
     
 0.938
ENSPLAP00000014004
Uncharacterized protein.
  
  
 
0.898
elp3
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.896
elp5
Elongator acetyltransferase complex subunit 5.
   
 
 0.823
elp1
Elongator complex protein 1.
    
 
 0.820
sec11a
Signal peptidase complex catalytic subunit SEC11.
     
 0.781
sgce
Sarcoglycan, epsilon.
     
 0.774
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.