Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
POLR2E | leo1 | ENSPLAP00000011389 | ENSPLAP00000005905 | RNA polymerase II subunit E. | LEO1 homolog, Paf1/RNA polymerase II complex component. | 0.995 |
POLR2E | pih1d1 | ENSPLAP00000011389 | ENSPLAP00000022663 | RNA polymerase II subunit E. | PIH1 domain containing 1. | 0.887 |
POLR2E | pih1d2 | ENSPLAP00000011389 | ENSPLAP00000030685 | RNA polymerase II subunit E. | PIH1 domain containing 2. | 0.736 |
POLR2E | rpap3 | ENSPLAP00000011389 | ENSPLAP00000014586 | RNA polymerase II subunit E. | RNA polymerase II associated protein 3. | 0.854 |
POLR2E | ruvbl1 | ENSPLAP00000011389 | ENSPLAP00000028560 | RNA polymerase II subunit E. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.879 |
POLR2E | ruvbl2 | ENSPLAP00000011389 | ENSPLAP00000028624 | RNA polymerase II subunit E. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.862 |
POLR2E | wdr92 | ENSPLAP00000011389 | ENSPLAP00000014111 | RNA polymerase II subunit E. | WD repeat domain 92. | 0.705 |
actr5 | actr8 | ENSPLAP00000006723 | ENSPLAP00000020884 | Actin related protein 5; Belongs to the actin family. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.993 |
actr5 | ino80c | ENSPLAP00000006723 | ENSPLAP00000007520 | Actin related protein 5; Belongs to the actin family. | INO80 complex subunit C. | 0.999 |
actr5 | rpap3 | ENSPLAP00000006723 | ENSPLAP00000014586 | Actin related protein 5; Belongs to the actin family. | RNA polymerase II associated protein 3. | 0.929 |
actr5 | ruvbl1 | ENSPLAP00000006723 | ENSPLAP00000028560 | Actin related protein 5; Belongs to the actin family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.999 |
actr5 | ruvbl2 | ENSPLAP00000006723 | ENSPLAP00000028624 | Actin related protein 5; Belongs to the actin family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.995 |
actr8 | actr5 | ENSPLAP00000020884 | ENSPLAP00000006723 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | Actin related protein 5; Belongs to the actin family. | 0.993 |
actr8 | ino80c | ENSPLAP00000020884 | ENSPLAP00000007520 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | INO80 complex subunit C. | 0.996 |
actr8 | rpap3 | ENSPLAP00000020884 | ENSPLAP00000014586 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | RNA polymerase II associated protein 3. | 0.838 |
actr8 | ruvbl1 | ENSPLAP00000020884 | ENSPLAP00000028560 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.995 |
actr8 | ruvbl2 | ENSPLAP00000020884 | ENSPLAP00000028624 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.982 |
ino80c | actr5 | ENSPLAP00000007520 | ENSPLAP00000006723 | INO80 complex subunit C. | Actin related protein 5; Belongs to the actin family. | 0.999 |
ino80c | actr8 | ENSPLAP00000007520 | ENSPLAP00000020884 | INO80 complex subunit C. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.996 |
ino80c | leo1 | ENSPLAP00000007520 | ENSPLAP00000005905 | INO80 complex subunit C. | LEO1 homolog, Paf1/RNA polymerase II complex component. | 0.594 |
page 1 of 4