STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106952057Si:ch211-195e19.1. (221 aa)    
Predicted Functional Partners:
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
 0.919
LOC106952056
Si:ch211-195e19.1.
  
  
 
0.899
ENSPLAP00000014610
Si:ch211-81n22.1.
  
  
 
0.896
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.804
naa38
N(alpha)-acetyltransferase 38, NatC auxiliary subunit.
    
 0.638
ENSPLAP00000003015
Ig-like domain-containing protein.
    
 0.638
ENSPLAP00000011100
Small nuclear ribonucleoprotein-associated protein.
    
 0.638
ENSPLAP00000021015
Ig-like domain-containing protein.
    
 0.638
nat8l
N-acetyltransferase 8-like.
     
0.636
rimkla
Ribosomal modification protein rimK-like family member A.
     
 0.615
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.