STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf148Zinc finger protein 148. (816 aa)    
Predicted Functional Partners:
dhx58
DEXH (Asp-Glu-X-His) box polypeptide 58.
    
 
 0.666
LOC106953407
Rac family small GTPase 2.
    
 0.651
LOC106961740
Tyrosine-protein kinase.
    
 0.649
ENSPLAP00000023487
Tyrosine-protein kinase.
    
 0.648
hlx
H2.0-like homeo box 1 (Drosophila).
   
 
 0.629
rc3h1
Ring finger and CCCH-type domains 1b.
    
 
 0.628
LOC106953973
Phosphodiesterase.
    
 0.619
PRKCA
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.615
ENSPLAP00000014192
NDK domain-containing protein.
    
 0.604
arhgef2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
      
 0.594
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.