STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106951432Semaphorin 4e; Belongs to the semaphorin family. (754 aa)    
Predicted Functional Partners:
ENSPLAP00000003369
Uncharacterized protein.
    
 0.782
plxnb2
Plexin b2b.
    
 0.782
plxnb1
Plexin b1b.
    
0.782
ENSPLAP00000021228
Sema domain-containing protein.
    
0.782
LOC106953105
Plexin b2a.
    
0.782
LOC106947660
Plexin b1a.
    
 0.782
ptprc
Uncharacterized protein.
    
 0.750
LOC106936874
Plexin C1.
    
 0.738
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.736
LOC106949456
Macrophage stimulating 1 receptor a.
    
 0.736
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.