STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000015856BED-type domain-containing protein. (573 aa)    
Predicted Functional Partners:
LOC106943827
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.442
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.442
LOC106943710
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.442
LOC106951120
Uncharacterized protein.
    
 0.430
chd5
Chromodomain helicase DNA binding protein 5.
    
 0.430
LOC106952225
Chromodomain helicase DNA binding protein 4a.
    
 0.430
LOC106954568
Chromodomain helicase DNA binding protein 3.
    
 0.430
ENSPLAP00000029469
Autoimmune regulator.
    
 0.430
LOC106960917
Potassium channel tetramerization domain containing 2.
    
  0.429
asmtl
Acetylserotonin O-methyltransferase-like.
   
 
 0.420
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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