STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000015978KIND domain-containing protein. (208 aa)    
Predicted Functional Partners:
LOC106947675
Uncharacterized protein.
    
 
 0.717
plekha2
Si:ch211-204d2.4.
    
 0.711
ENSPLAP00000008549
APC_N_CC domain-containing protein.
   
 
 0.670
apc2
APC regulator of WNT signaling pathway 2.
   
 
 0.670
LOC106957628
Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b.
    
  0.669
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
    
 
 0.647
LOC106950546
Rap guanine nucleotide exchange factor (GEF) 6.
    
 
 0.647
LOC106937380
Rap guanine nucleotide exchange factor (GEF) 2.
    
 
 0.647
LOC106945580
Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1a.
    
  0.643
gab1
GRB2-associated binding protein 1.
    
 0.639
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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