STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106963543Ras and Rab interactor 2. (1121 aa)    
Predicted Functional Partners:
LOC106952935
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
0.707
rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
    
0.707
LOC106951453
Uncharacterized protein.
    
0.707
abl1
Tyrosine-protein kinase.
    
 0.642
abl2
Tyrosine-protein kinase.
    
 0.642
ENSPLAP00000024052
Si:ch211-167j9.5.
    
 0.642
LOC106939465
RAB5C, member RAS oncogene family.
    
 0.638
rab5a
Uncharacterized protein.
    
 0.638
LOC106950324
RAB5B, member RAS oncogene family.
    
 0.638
LOC106950562
Ras-related protein Rab-5B-like.
    
 0.638
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.