STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000016494Rho-GAP domain-containing protein. (89 aa)    
Predicted Functional Partners:
LOC106954136
Intersectin 2b.
    
 0.761
ENSPLAP00000017806
Uncharacterized protein.
    
 0.761
ENSPLAP00000030866
Uncharacterized protein.
    
 0.761
ENSPLAP00000030875
Uncharacterized protein.
    
 0.761
CDC42
Cell division cycle 42.
   
 0.726
LOC106964683
Cell division cycle 42.
   
 0.726
rictor
RPTOR independent companion of MTOR, complex 2 a.
    
 0.700
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.698
LOC106942740
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.698
mapkap1
MAPK associated protein 1.
    
 0.694
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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