STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000017946F5/8 type C domain-containing protein. (110 aa)    
Predicted Functional Partners:
cntn2
Contactin 2.
   
 0.671
LOC106934589
Uncharacterized protein.
   
 0.621
LOC106954066
Uncharacterized protein.
   
 0.621
cntn1
Uncharacterized protein.
   
 0.591
ENSPLAP00000001069
Uncharacterized protein.
   
 0.591
LOC106961136
Uncharacterized protein.
   
 0.591
LOC106945161
Contactin 3a, tandem duplicate 1.
   
 0.591
cntn5
Contactin 5.
   
 0.591
LOC106945156
Contactin 3a, tandem duplicate 2.
   
 0.591
LOC106955444
Contactin 1b.
   
 0.591
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.