STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106938220Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
LOC106961428
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.944
ENSPLAP00000015478
Spleen tyrosine kinase.
   
 
 0.943
LOC106958504
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.943
LOC106955277
MALT paracaspase 2.
    
 0.938
malt1
MALT paracaspase 1.
    
 0.938
LOC106946161
MALT paracaspase 3.
    
 0.932
ripk2
Receptor-interacting serine-threonine kinase 2.
   
 
 0.924
LOC106957415
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 
 0.904
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 
 0.904
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
     
 0.898
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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