ENSPLAP00000018223 protein (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPLAP00000018223

Si:dkey-238d18.12. (294 aa)

Predicted Functional Partners:

ptprc

0.645

ptpn6

0.604

LOC106938905

0.604

ptpn11

0.604

ENSPLAP00000004000

0.544

LOC106945289

0.529

LGR5

0.529

rxfp2

0.529

LOC106946991

0.529

LOC106936123

0.529

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000004000	ENSPLAP00000018223	ENSPLAP00000004000	ENSPLAP00000018223	Ig-like domain-containing protein.	Si:dkey-238d18.12.	0.544
ENSPLAP00000004000	LOC106938905	ENSPLAP00000004000	ENSPLAP00000020825	Ig-like domain-containing protein.	Protein tyrosine phosphatase non-receptor type 11b.	0.708
ENSPLAP00000004000	ptpn11	ENSPLAP00000004000	ENSPLAP00000030257	Ig-like domain-containing protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.708
ENSPLAP00000004000	ptpn6	ENSPLAP00000004000	ENSPLAP00000002707	Ig-like domain-containing protein.	Protein tyrosine phosphatase non-receptor type 6.	0.708
ENSPLAP00000004000	ptprc	ENSPLAP00000004000	ENSPLAP00000004198	Ig-like domain-containing protein.	Uncharacterized protein.	0.576
ENSPLAP00000018223	ENSPLAP00000004000	ENSPLAP00000018223	ENSPLAP00000004000	Si:dkey-238d18.12.	Ig-like domain-containing protein.	0.544
ENSPLAP00000018223	LGR5	ENSPLAP00000018223	ENSPLAP00000001565	Si:dkey-238d18.12.	Leucine rich repeat containing G protein-coupled receptor 5.	0.529
ENSPLAP00000018223	LOC106936123	ENSPLAP00000018223	ENSPLAP00000017318	Si:dkey-238d18.12.	Relaxin family peptide receptor 1.	0.529
ENSPLAP00000018223	LOC106938905	ENSPLAP00000018223	ENSPLAP00000020825	Si:dkey-238d18.12.	Protein tyrosine phosphatase non-receptor type 11b.	0.604
ENSPLAP00000018223	LOC106945289	ENSPLAP00000018223	ENSPLAP00000000915	Si:dkey-238d18.12.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.529
ENSPLAP00000018223	LOC106946991	ENSPLAP00000018223	ENSPLAP00000010920	Si:dkey-238d18.12.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.529
ENSPLAP00000018223	ptpn11	ENSPLAP00000018223	ENSPLAP00000030257	Si:dkey-238d18.12.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.604
ENSPLAP00000018223	ptpn6	ENSPLAP00000018223	ENSPLAP00000002707	Si:dkey-238d18.12.	Protein tyrosine phosphatase non-receptor type 6.	0.604
ENSPLAP00000018223	ptprc	ENSPLAP00000018223	ENSPLAP00000004198	Si:dkey-238d18.12.	Uncharacterized protein.	0.645
ENSPLAP00000018223	rxfp2	ENSPLAP00000018223	ENSPLAP00000006317	Si:dkey-238d18.12.	Relaxin family peptide receptor 2a.	0.529
LGR5	ENSPLAP00000018223	ENSPLAP00000001565	ENSPLAP00000018223	Leucine rich repeat containing G protein-coupled receptor 5.	Si:dkey-238d18.12.	0.529
LGR5	LOC106936123	ENSPLAP00000001565	ENSPLAP00000017318	Leucine rich repeat containing G protein-coupled receptor 5.	Relaxin family peptide receptor 1.	0.527
LGR5	LOC106945289	ENSPLAP00000001565	ENSPLAP00000000915	Leucine rich repeat containing G protein-coupled receptor 5.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.907
LGR5	LOC106946991	ENSPLAP00000001565	ENSPLAP00000010920	Leucine rich repeat containing G protein-coupled receptor 5.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.907
LGR5	ptprc	ENSPLAP00000001565	ENSPLAP00000004198	Leucine rich repeat containing G protein-coupled receptor 5.	Uncharacterized protein.	0.418