STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106936017Kelch-like family member 21. (611 aa)    
Predicted Functional Partners:
LOC106937213
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.828
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.828
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.726
bbs9
Bardet-Biedl syndrome 9.
    
 0.697
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.684
klhl22
Kelch-like family member 22.
    
0.675
ubxn7
UBX domain protein 7.
    
 0.669
ttc8
Tetratricopeptide repeat domain 8.
    
  0.665
klhl20
Kelch-like family member 20.
    
 
0.639
LOC106934764
NEDD8 ubiquitin like modifier.
    
 0.636
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.