slc25a24 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

slc25a24

Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (475 aa)

Predicted Functional Partners:

ndufs3

0.917

ndufs7

0.897

LOC106950482

0.855

NDUFV1

0.849

LOC106960537

0.849

ndufa8

0.841

ndufb7

0.817

ndufv2

0.799

NDUFA13

0.798

ndufb10

0.791

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106950482	LOC106960537	ENSPLAP00000020938	ENSPLAP00000008789	Si:dkey-57k2.7.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.996
LOC106950482	NDUFA13	ENSPLAP00000020938	ENSPLAP00000008554	Si:dkey-57k2.7.	NADH:ubiquinone oxidoreductase subunit A13.	0.997
LOC106950482	NDUFV1	ENSPLAP00000020938	ENSPLAP00000006617	Si:dkey-57k2.7.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.996
LOC106950482	ndufa8	ENSPLAP00000020938	ENSPLAP00000003923	Si:dkey-57k2.7.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.998
LOC106950482	ndufb10	ENSPLAP00000020938	ENSPLAP00000013030	Si:dkey-57k2.7.	NADH:ubiquinone oxidoreductase subunit B10.	0.997
LOC106950482	ndufb7	ENSPLAP00000020938	ENSPLAP00000001605	Si:dkey-57k2.7.	NADH:ubiquinone oxidoreductase subunit B7.	0.997
LOC106950482	ndufs3	ENSPLAP00000020938	ENSPLAP00000004419	Si:dkey-57k2.7.	NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family.	0.999
LOC106950482	ndufv2	ENSPLAP00000020938	ENSPLAP00000026034	Si:dkey-57k2.7.	NADH:ubiquinone oxidoreductase core subunit V2.	0.999
LOC106950482	slc25a24	ENSPLAP00000020938	ENSPLAP00000019061	Si:dkey-57k2.7.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.855
LOC106960537	LOC106950482	ENSPLAP00000008789	ENSPLAP00000020938	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Si:dkey-57k2.7.	0.996
LOC106960537	NDUFA13	ENSPLAP00000008789	ENSPLAP00000008554	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	NADH:ubiquinone oxidoreductase subunit A13.	0.999
LOC106960537	NDUFV1	ENSPLAP00000008789	ENSPLAP00000006617	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.925
LOC106960537	ndufa8	ENSPLAP00000008789	ENSPLAP00000003923	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.998
LOC106960537	ndufb10	ENSPLAP00000008789	ENSPLAP00000013030	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	NADH:ubiquinone oxidoreductase subunit B10.	0.994
LOC106960537	ndufb7	ENSPLAP00000008789	ENSPLAP00000001605	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	NADH:ubiquinone oxidoreductase subunit B7.	0.998
LOC106960537	ndufs3	ENSPLAP00000008789	ENSPLAP00000004419	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family.	0.999
LOC106960537	ndufs7	ENSPLAP00000008789	ENSPLAP00000023128	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.	0.999
LOC106960537	ndufv2	ENSPLAP00000008789	ENSPLAP00000026034	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	NADH:ubiquinone oxidoreductase core subunit V2.	0.999
LOC106960537	slc25a24	ENSPLAP00000008789	ENSPLAP00000019061	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.849
NDUFA13	LOC106950482	ENSPLAP00000008554	ENSPLAP00000020938	NADH:ubiquinone oxidoreductase subunit A13.	Si:dkey-57k2.7.	0.997