STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stard7StAR-related lipid transfer (START) domain containing 7. (397 aa)    
Predicted Functional Partners:
MARCHF6
Membrane associated ring-CH-type finger 6.
   
  
 0.601
ENSPLAP00000007808
RING-CH-type domain-containing protein.
   
  
 0.601
samd12
SAM domain-containing protein.
      
 0.593
LOC106937380
Rap guanine nucleotide exchange factor (GEF) 2.
      
 0.593
stard3
StAR-related lipid transfer (START) domain containing 3.
      
 0.589
stard5
StAR-related lipid transfer (START) domain containing 5.
      
 0.553
star
Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.
      
 0.552
yeats2
YEATS domain containing 2.
      
 0.548
triap1
TP53 regulated inhibitor of apoptosis 1.
      
 0.534
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
      
 0.532
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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