STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000019417Ig-like domain-containing protein. (258 aa)    
Predicted Functional Partners:
ENSPLAP00000024154
Ig-like domain-containing protein.
    
  0.862
ENSPLAP00000004741
Uncharacterized protein.
    
  0.777
LOC106949900
Uncharacterized protein.
    
  0.777
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.751
fancm
Uncharacterized protein.
    
 0.740
pold1
DNA polymerase.
   
 0.736
LOC106941750
Survival of motor neuron 1, telomeric.
    
 0.711
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.700
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.689
snrpd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.679
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.