STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106955282Mitochondrial ribosomal protein L54. (139 aa)    
Predicted Functional Partners:
LOC106962059
Mitochondrial ribosomal protein L23.
   
 
 0.974
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.965
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.963
mrps16
Mitochondrial ribosomal protein S16.
   
   0.962
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.954
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.953
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.947
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.944
mrpl43
Mitochondrial ribosomal protein L43.
   
 
 0.935
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.934
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.