STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arid5bAT-rich interaction domain 5B. (1179 aa)    
Predicted Functional Partners:
sap30l
Sap30-like.
    
 0.731
wdr73
WD repeat domain 73.
    
 0.667
LOC106952289
Retinoblastoma binding protein 4.
    
 0.667
ENSPLAP00000014870
CAF1C_H4-bd domain-containing protein.
    
 0.667
actl6a
Actin-like 6A; Belongs to the actin family.
    
 
 0.662
ENSPLAP00000031040
Uncharacterized protein.
    
 
 0.651
phf8
PHD finger protein 8.
     
 0.649
kdm7a
Lysine (K)-specific demethylase 7Ab.
     
 0.649
phf2
PHD finger protein 2.
     
 0.649
LOC106940863
Polybromo 1, like.
   
 
 0.632
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.