STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rapsnReceptor-associated protein of the synapse, 43kD. (412 aa)    
Predicted Functional Partners:
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
   
 
 0.663
chrnd
Cholinergic receptor, nicotinic, delta (muscle).
   
 
 0.634
LOC106953372
Cholinergic receptor, nicotinic, epsilon.
   
 
 0.626
chrng
Cholinergic receptor, nicotinic, gamma.
   
 
 0.615
MUSK
Muscle associated receptor tyrosine kinase.
   
  
 0.603
chrnb1
Cholinergic receptor, nicotinic, beta 1 (muscle).
   
 
 0.592
ENSPLAP00000008816
Uncharacterized protein.
      
 0.590
LOC106951936
Neuralized E3 ubiquitin protein ligase 1Aa.
      
 0.590
neurl1b
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.590
DOK7
Docking protein 7.
      
 0.589
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.