STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106955129ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b. (852 aa)    
Predicted Functional Partners:
arfgap3
ADP-ribosylation factor GTPase activating protein 3.
    
0.773
ARAP1
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1.
   
 
0.742
LOC106963992
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
   
 
0.739
LOC106956532
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
     
0.727
rab35
RAB35, member RAS oncogene family b.
    
 
 0.671
LOC106958715
Si:dkey-16l2.16.
    
 
 0.671
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
0.660
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
0.660
arfgap1
ADP-ribosylation factor GTPase activating protein 1.
   
0.648
ENSPLAP00000003034
ADP-ribosylation factor 6b.
    
 0.634
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.