STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000021185Uncharacterized protein. (1372 aa)    
Predicted Functional Partners:
ENSPLAP00000030043
Uncharacterized protein.
   
 0.913
lamc1
Laminin, gamma 1.
   
0.841
ENSPLAP00000006573
Uncharacterized protein.
   
0.841
LOC106951719
Laminin, gamma 3.
   
0.841
ENSPLAP00000024434
Laminin N-terminal domain-containing protein.
   
 0.841
LOC106943660
Uncharacterized protein.
    
0.744
LOC106955924
Laminin, beta 1b.
    
0.744
LOC106943606
Laminin, beta 2 (laminin S).
    
0.744
lamb1
Laminin, beta 1a.
    
0.744
LOC106964883
Laminin, beta 2-like.
    
0.744
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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