STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106939460B30.2/SPRY domain-containing protein. (690 aa)    
Predicted Functional Partners:
nek7
NIMA-related kinase 7; Belongs to the protein kinase superfamily.
    
  0.546
LOC106955773
Protein kinase domain-containing protein.
    
  0.512
LOC106938010
V-rel avian reticuloendotheliosis viral oncogene homolog A.
    
  0.478
ENSPLAP00000008065
FIIND domain-containing protein.
    
  0.478
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
    
  0.478
ENSPLAP00000016211
Uncharacterized protein.
    
  0.478
REL
REL proto-oncogene, NF-kB subunit.
    
  0.478
rps27a
Ribosomal protein S27a.
    
  0.474
ube2l3
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.445
zfand4
Zinc finger, AN1-type domain 4.
    
  0.441
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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