STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106963206Cathepsin S, ortholog 1; Belongs to the peptidase C1 family. (331 aa)    
Predicted Functional Partners:
bcl2
BCL2 apoptosis regulator b.
   
 
 0.905
LOC106949137
Cathepsin K; Belongs to the peptidase C1 family.
  
  
 
0.901
birc2
Baculoviral IAP repeat containing 2.
     
 0.899
LOC106950807
Baculoviral IAP repeat containing 5b.
     
 0.897
LOC106961723
Baculoviral IAP repeat containing 5a.
     
 0.897
LOC106934467
BH4_2 domain-containing protein.
     
 0.896
BCL2L1
BCL2 like 1.
     
 0.896
LOC106964079
X-linked inhibitor of apoptosis.
     
 0.793
LOC106964602
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.686
LOC106949364
Cathepsin D; Belongs to the peptidase A1 family.
   
 0.686
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.