Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC106956760 | LOC106963197 | ENSPLAP00000029350 | ENSPLAP00000021426 | Musashi RNA binding protein 2. | RRM domain-containing protein. | 0.415 |
LOC106956760 | TRA2B | ENSPLAP00000029350 | ENSPLAP00000026844 | Musashi RNA binding protein 2. | Transformer 2 beta homolog. | 0.660 |
LOC106956760 | cirbp | ENSPLAP00000029350 | ENSPLAP00000008548 | Musashi RNA binding protein 2. | Cold inducible RNA binding protein b. | 0.641 |
LOC106956760 | ncl | ENSPLAP00000029350 | ENSPLAP00000018993 | Musashi RNA binding protein 2. | Nucleolin. | 0.476 |
LOC106963197 | LOC106956760 | ENSPLAP00000021426 | ENSPLAP00000029350 | RRM domain-containing protein. | Musashi RNA binding protein 2. | 0.415 |
LOC106963197 | RBMS3 | ENSPLAP00000021426 | ENSPLAP00000030131 | RRM domain-containing protein. | RNA binding motif single stranded interacting protein 3. | 0.567 |
LOC106963197 | TRA2B | ENSPLAP00000021426 | ENSPLAP00000026844 | RRM domain-containing protein. | Transformer 2 beta homolog. | 0.404 |
LOC106963197 | cirbp | ENSPLAP00000021426 | ENSPLAP00000008548 | RRM domain-containing protein. | Cold inducible RNA binding protein b. | 0.449 |
LOC106963197 | ncl | ENSPLAP00000021426 | ENSPLAP00000018993 | RRM domain-containing protein. | Nucleolin. | 0.405 |
RBMS3 | LOC106963197 | ENSPLAP00000030131 | ENSPLAP00000021426 | RNA binding motif single stranded interacting protein 3. | RRM domain-containing protein. | 0.567 |
TRA2B | LOC106956760 | ENSPLAP00000026844 | ENSPLAP00000029350 | Transformer 2 beta homolog. | Musashi RNA binding protein 2. | 0.660 |
TRA2B | LOC106963197 | ENSPLAP00000026844 | ENSPLAP00000021426 | Transformer 2 beta homolog. | RRM domain-containing protein. | 0.404 |
TRA2B | cirbp | ENSPLAP00000026844 | ENSPLAP00000008548 | Transformer 2 beta homolog. | Cold inducible RNA binding protein b. | 0.678 |
TRA2B | ncl | ENSPLAP00000026844 | ENSPLAP00000018993 | Transformer 2 beta homolog. | Nucleolin. | 0.566 |
cirbp | LOC106956760 | ENSPLAP00000008548 | ENSPLAP00000029350 | Cold inducible RNA binding protein b. | Musashi RNA binding protein 2. | 0.641 |
cirbp | LOC106963197 | ENSPLAP00000008548 | ENSPLAP00000021426 | Cold inducible RNA binding protein b. | RRM domain-containing protein. | 0.449 |
cirbp | TRA2B | ENSPLAP00000008548 | ENSPLAP00000026844 | Cold inducible RNA binding protein b. | Transformer 2 beta homolog. | 0.678 |
cirbp | ncl | ENSPLAP00000008548 | ENSPLAP00000018993 | Cold inducible RNA binding protein b. | Nucleolin. | 0.577 |
ncl | LOC106956760 | ENSPLAP00000018993 | ENSPLAP00000029350 | Nucleolin. | Musashi RNA binding protein 2. | 0.476 |
ncl | LOC106963197 | ENSPLAP00000018993 | ENSPLAP00000021426 | Nucleolin. | RRM domain-containing protein. | 0.405 |
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