STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps28Mitochondrial ribosomal protein S28. (173 aa)    
Predicted Functional Partners:
ENSPLAP00000001668
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
  0.999
ENSPLAP00000002570
Mitochondrial ribosomal protein S6.
   
  0.999
mrps35
Mitochondrial ribosomal protein S35.
   
  0.999
ENSPLAP00000005759
Mitochondrial ribosomal protein S33.
   
  0.999
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
  0.999
mrps22
Mitochondrial ribosomal protein S22.
   
  0.999
mrps31
Mitochondrial ribosomal protein S31.
   
  0.999
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
  0.999
mrps14
Mitochondrial ribosomal protein S14.
   
  0.999
mrps16
Mitochondrial ribosomal protein S16.
   
  0.999
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.