STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudt18Nudix (nucleoside diphosphate linked moiety X)-type motif 18; Belongs to the Nudix hydrolase family. (338 aa)    
Predicted Functional Partners:
nudt5
Nudix (nucleoside diphosphate linked moiety X)-type motif 5.
      
 0.590
nudt2
Nudix (nucleoside diphosphate linked moiety X)-type motif 2.
      
 0.589
nudt14
Nudix (nucleoside diphosphate linked moiety X)-type motif 14.
      
 0.589
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
      
 0.550
nudt22
Nudix (nucleoside diphosphate linked moiety X)-type motif 22.
      
 0.543
nudt1
Nudix (nucleoside diphosphate linked moiety X)-type motif 1; Belongs to the Nudix hydrolase family.
      
 0.541
nudt21
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
      
 0.540
nudt6
Nudix (nucleoside diphosphate linked moiety X)-type motif 6.
      
 0.516
nudt3
Nudix (nucleoside diphosphate linked moiety X)-type motif 3b.
      
 0.499
LOC106961204
Uncharacterized protein.
      
 0.483
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.