STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106955114Si:dkey-22o22.2; Cadherins are calcium-dependent cell adhesion proteins. (2605 aa)    
Predicted Functional Partners:
LOC106953978
Uncharacterized protein.
    
 0.712
LOC106963833
Junction plakoglobin a.
    
 0.712
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.712
fjx1
Four-jointed box kinase 1.
   
 0.674
LOC106937443
Protocadherin-related 15a.
   
0.662
LOC106949363
Uncharacterized protein.
   
0.662
LOC106943058
CA domain-containing protein.
   
 0.662
ENSPLAP00000001432
Uncharacterized protein.
    
 0.617
ctnna1
Catenin (cadherin-associated protein), alpha 1.
    
 0.617
LOC106948405
Catenin (cadherin-associated protein), alpha 2.
    
 0.617
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.