STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000021877Uncharacterized protein. (386 aa)    
Predicted Functional Partners:
ENSPLAP00000015150
A2M_recep domain-containing protein.
 
    
 0.852
LOC106957191
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.774
LOC106958634
Chromobox homolog 8b.
    
 0.774
rnf2
Ring finger protein 2.
    
 0.764
RING1
Ring finger protein 1.
    
 0.764
pcgf2
Polycomb group ring finger 2.
    
 0.756
bmi1
Bmi1 polycomb ring finger oncogene 1a.
    
 0.756
c9
Complement component 9.
   
 0.748
cfp
Uncharacterized protein.
    
 0.718
cbx6
Chromobox homolog 6a.
    
 0.678
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.