STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000022225Ig-like domain-containing protein. (331 aa)    
Predicted Functional Partners:
LOC106955637
Si:ch73-22o12.1.
    
 0.693
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.658
LOC106956946
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
  0.658
ENSPLAP00000009205
Ig-like domain-containing protein.
    
  0.642
cadm1
Cell adhesion molecule 1b.
    
  0.642
ENSPLAP00000014378
Uncharacterized protein.
    
 0.623
LOC106946965
Uncharacterized protein.
    
 0.623
LOC106935365
Afadin, adherens junction formation factor a.
    
 0.623
tjp2
Tight junction protein 2a (zona occludens 2); Belongs to the MAGUK family.
    
 0.587
LOC106961235
Tight junction protein 1a; Belongs to the MAGUK family.
    
 0.587
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.