STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc174Coiled-coil domain containing 174. (549 aa)    
Predicted Functional Partners:
dld
Dihydrolipoamide dehydrogenase.
   
    0.833
nrde2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.796
ZNF830
Zinc finger protein 830.
   
    0.766
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
    0.761
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
    
 
 0.690
LOC106958338
Profilin; Belongs to the profilin family.
    
 0.662
LOC106946385
Profilin; Belongs to the profilin family.
    
 0.662
fyttd1
Uncharacterized protein.
    
 0.662
LOC106953049
Profilin; Belongs to the profilin family.
    
 0.662
LOC106936540
PH domain-containing protein.
   
 
 0.661
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.