Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATXN7L1 | ENSPLAP00000005771 | ENSPLAP00000023095 | ENSPLAP00000005771 | Ataxin 7 like 1. | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.982 |
ATXN7L1 | LOC106938866 | ENSPLAP00000023095 | ENSPLAP00000021256 | Ataxin 7 like 1. | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.985 |
ATXN7L1 | LOC106942329 | ENSPLAP00000023095 | ENSPLAP00000007193 | Ataxin 7 like 1. | Ubiquitin carboxyl-terminal hydrolase. | 0.962 |
ATXN7L1 | LOC106957223 | ENSPLAP00000023095 | ENSPLAP00000019686 | Ataxin 7 like 1. | Ubiquitin carboxyl-terminal hydrolase. | 0.962 |
ATXN7L1 | eny2 | ENSPLAP00000023095 | ENSPLAP00000016862 | Ataxin 7 like 1. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.982 |
ATXN7L1 | sgf29 | ENSPLAP00000023095 | ENSPLAP00000012475 | Ataxin 7 like 1. | SAGA complex associated factor 29. | 0.965 |
ATXN7L1 | supt20h | ENSPLAP00000023095 | ENSPLAP00000029974 | Ataxin 7 like 1. | SPT20 homolog, SAGA complex component. | 0.968 |
ATXN7L1 | supt3h | ENSPLAP00000023095 | ENSPLAP00000001002 | Ataxin 7 like 1. | Uncharacterized protein. | 0.976 |
ATXN7L1 | tada3 | ENSPLAP00000023095 | ENSPLAP00000019966 | Ataxin 7 like 1. | Transcriptional adaptor 3 (NGG1 homolog, yeast)-like. | 0.982 |
ATXN7L1 | taf10 | ENSPLAP00000023095 | ENSPLAP00000013993 | Ataxin 7 like 1. | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.985 |
ENSPLAP00000005771 | ATXN7L1 | ENSPLAP00000005771 | ENSPLAP00000023095 | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | Ataxin 7 like 1. | 0.982 |
ENSPLAP00000005771 | LOC106938866 | ENSPLAP00000005771 | ENSPLAP00000021256 | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.999 |
ENSPLAP00000005771 | LOC106942329 | ENSPLAP00000005771 | ENSPLAP00000007193 | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | Ubiquitin carboxyl-terminal hydrolase. | 0.976 |
ENSPLAP00000005771 | LOC106957223 | ENSPLAP00000005771 | ENSPLAP00000019686 | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | Ubiquitin carboxyl-terminal hydrolase. | 0.976 |
ENSPLAP00000005771 | eny2 | ENSPLAP00000005771 | ENSPLAP00000016862 | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.992 |
ENSPLAP00000005771 | sgf29 | ENSPLAP00000005771 | ENSPLAP00000012475 | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | SAGA complex associated factor 29. | 0.998 |
ENSPLAP00000005771 | supt20h | ENSPLAP00000005771 | ENSPLAP00000029974 | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | SPT20 homolog, SAGA complex component. | 0.998 |
ENSPLAP00000005771 | supt3h | ENSPLAP00000005771 | ENSPLAP00000001002 | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | Uncharacterized protein. | 0.997 |
ENSPLAP00000005771 | tada3 | ENSPLAP00000005771 | ENSPLAP00000019966 | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | Transcriptional adaptor 3 (NGG1 homolog, yeast)-like. | 0.991 |
ENSPLAP00000005771 | taf10 | ENSPLAP00000005771 | ENSPLAP00000013993 | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.999 |
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