STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106952392Uncharacterized protein. (196 aa)    
Predicted Functional Partners:
snrpg
Small nuclear ribonucleoprotein G.
    
   0.658
lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
   0.516
LOC106939276
Centromere protein P.
    
   0.504
emsy
EMSY transcriptional repressor, BRCA2 interacting.
    
   0.504
psmb1
Proteasome subunit beta.
    
   0.504
ENSPLAP00000020823
Uncharacterized protein.
      
 0.424
lamtor3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
      
 0.422
dapp1
Dual adaptor of phosphotyrosine and 3-phosphoinositides.
      
 0.422
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.