STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106956517Si:ch73-263o4.3. (320 aa)    
Predicted Functional Partners:
THNSL1
Threonine synthase like 1.
  
 
 0.881
thnsl2
Threonine synthase-like 2.
  
 
 0.881
eprs1
Uncharacterized protein.
  
 
  0.848
EPRS1
Glutamyl-prolyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
  0.848
LOC106959593
Threonine aldolase 1.
  
 
 0.847
LOC106958092
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.831
LOC106962423
Branched chain amino-acid transaminase 2, mitochondrial.
  
 
 0.831
cth
Cystathionase (cystathionine gamma-lyase), like.
  
 
 0.825
LOC106955235
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
  
 0.807
LOC106941218
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
  
 0.807
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.