STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000023651Uncharacterized protein. (139 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.915
ints1
Integrator complex subunit 1.
    
 0.890
ints13
Integrator complex subunit 13.
    
 0.879
ints5
Integrator complex subunit 5.
    
 0.867
ints3
Integrator complex subunit 3.
    
 0.863
ints10
Integrator complex subunit 10.
   
 0.858
ints9
Integrator complex subunit 9.
  
 0.790
ENSPLAP00000020611
TROVE domain-containing protein.
   
 0.790
ENSPLAP00000020621
Uncharacterized protein.
   
 0.790
supt5h
Transcription elongation factor SPT5.
    
 0.788
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.