STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb4Ankyrin repeat and SOCS box containing 4. (439 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport 81 homolog.
    
 0.670
commd1
Copper metabolism (Murr1) domain containing 1.
    
 0.667
commd8
COMM domain containing 8.
   
  0.660
LOC106934764
NEDD8 ubiquitin like modifier.
    
  0.648
LOC106944743
NEDD8 ubiquitin like modifier.
    
  0.648
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.643
LOC106940681
Fleer.
    
 0.641
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.633
LOC106956567
COMM domain containing 4.
    
 0.611
ift88
Intraflagellar transport 88 homolog.
   
 0.596
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.