STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufuSuppressor of fused homolog. (471 aa)    
Predicted Functional Partners:
gli1
GLI family zinc finger 1.
    
 0.988
LOC106950373
Uncharacterized protein.
    
 0.985
stk36
Serine/threonine kinase 36 (fused homolog, Drosophila).
    
 0.982
ulk4
Protein kinase domain-containing protein.
    
 0.982
LOC106954091
GLI family zinc finger 2a.
    
 0.978
SPOP
Speckle type BTB/POZ protein.
     
 0.970
LOC106937213
CULLIN_2 domain-containing protein; Belongs to the cullin family.
     
 0.960
CUL3
Cullin 3; Belongs to the cullin family.
     
 0.960
LOC106957989
Uncharacterized protein.
    
 0.953
LOC106936562
GLI family zinc finger 3.
    
 0.953
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.