STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlx3Homeobox domain-containing protein. (282 aa)    
Predicted Functional Partners:
LOC106940857
ISL LIM homeobox 1.
   
 
 0.703
arx
Aristaless related homeobox a.
    
 
0.662
lhx1
LIM homeobox 1a.
    
 
 0.645
ENSPLAP00000010753
LIM zinc-binding domain-containing protein.
    
 
 0.645
LOC106940521
Uncharacterized protein.
      
 0.593
LOC106940926
Uncharacterized protein.
      
 0.528
LOC106937107
Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.
      
 0.505
TBX22
T-box transcription factor 22.
   
 
 0.455
ENSPLAP00000022846
Lysyl oxidase-like 4.
    
 
 0.430
loxl3
Lysyl oxidase-like 3b.
    
 
 0.430
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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