STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106960556Adrenoceptor alpha 1Ab. (465 aa)    
Predicted Functional Partners:
LOC106952122
Guanine nucleotide binding protein (G protein), alpha 13b.
    
 0.969
LOC106963571
Uncharacterized protein.
    
 0.969
LOC106939093
Uncharacterized protein.
    
 0.969
LOC106955270
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.954
LOC106954511
Guanine nucleotide binding protein (G protein), alpha 14.
    
  0.952
ENSPLAP00000020748
Uncharacterized protein.
    
 0.948
LOC106954508
G protein subunit alpha q.
    
  0.938
LOC106947790
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.934
LOC106963572
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.934
LOC106955271
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
 0.927
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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