STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnih4Cornichon family AMPA receptor auxiliary protein 4. (131 aa)    
Predicted Functional Partners:
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.859
LOC106954491
Uncharacterized protein.
    
 0.818
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.818
tmed2
Transmembrane p24 trafficking protein 2.
    
 0.791
CNIH2
Cornichon family AMPA receptor auxiliary protein 2.
  
  
 0.780
ENSPLAP00000000716
Uncharacterized protein.
    
 0.768
LOC106964583
Glutamate receptor, ionotropic, AMPA 1a.
    
 0.768
LOC106959835
Uncharacterized protein.
    
 0.768
ENSPLAP00000006347
PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.768
LOC106947084
Uncharacterized protein.
    
 0.768
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.