STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspoap1Uncharacterized protein. (1923 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.998
LOC106951829
Uncharacterized protein.
    
 0.998
LOC106949934
Regulating synaptic membrane exocytosis 1a.
    
 0.738
LOC106945350
Regulating synaptic membrane exocytosis 3.
    
 0.738
ENSPLAP00000003344
PDZ domain-containing protein.
    
 0.695
ENSPLAP00000003352
C2 domain-containing protein.
    
 0.695
LOC106959243
Uncharacterized protein.
   
 0.683
ENSPLAP00000016487
Unc-13 homolog Ba (C. elegans).
   
 0.683
UNC13C
Unc-13 homolog C.
   
 0.683
UNC13B
Unc-13 homolog B.
   
 0.683
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.