STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106940872Uncharacterized protein. (119 aa)    
Predicted Functional Partners:
psmc2
Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.
    
   0.663
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
   
   0.663
psmb1
Proteasome subunit beta.
    
   0.663
psma1
Proteasome subunit alpha type.
    
   0.663
psma5
Proteasome subunit alpha type.
    
   0.663
bag6
BCL2 associated athanogene 6.
    
   0.663
psma2
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
    
   0.663
psmc1
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
    
   0.663
psmd8
Proteasome 26S subunit, non-ATPase 8.
    
   0.663
psmd12
Proteasome 26S subunit, non-ATPase 12.
   
   0.663
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.