STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankmy2Ankyrin repeat and MYND domain containing 2a. (426 aa)    
Predicted Functional Partners:
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.767
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
   
 0.659
usp25
Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.
    
 0.644
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.631
LOC106950838
Lectin, mannose-binding 2-like a.
    
 
 0.620
snx13
Sorting nexin 13.
    
 
 0.615
LOC106937856
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
    
 0.614
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.593
ifrd1
Interferon-related developmental regulator 1.
    
 0.592
LOC106956347
Interferon-related developmental regulator 2.
    
 0.592
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.