STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106938548Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
LOC106959291
PITPNM family member 3.
 
    
 0.744
dolk
Dolichol kinase.
    
 0.668
LOC106937198
Phospholipase A2, group XV.
    
 0.595
LOC106937204
Lecithin-cholesterol acyltransferase.
    
 0.595
cnep1r1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
     
 0.554
dgat2
Diacylglycerol O-acyltransferase 2.
    
 0.544
mogat2
Monoacylglycerol O-acyltransferase 2.
    
 0.544
LOC106953369
Monoacylglycerol O-acyltransferase 3b.
    
 0.544
LOC106941935
Uncharacterized protein.
    
 0.544
LOC106946045
O-acyltransferase.
    
 0.533
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.